Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-34b in CA Renal Higgins Cluster 4 Table contains all genes in the CA Renal Higgins cluster number 4. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-34b 55207 ARL8B ADP-ribosylation factor-like 8B [Source:HGNC Symbol;Acc:25564] zzz999 5105 PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) [Source:HGNC Symbol;Acc:8724] zzz999 10069 RWDD2B RWD domain containing 2B [Source:HGNC Symbol;Acc:1302] zzz999 159 ADSS adenylosuccinate synthase [Source:HGNC Symbol;Acc:292] zzz999 79582 SPAG16 sperm associated antigen 16 [Source:HGNC Symbol;Acc:23225] zzz999 2628 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:HGNC Symbol;Acc:4175] zzz999 79170 PRR15L proline rich 15-like [Source:HGNC Symbol;Acc:28149] zzz999 25853 DCAF12 DDB1 and CUL4 associated factor 12 [Source:HGNC Symbol;Acc:19911] T 9445 ITM2B integral membrane protein 2B [Source:HGNC Symbol;Acc:6174] P T 23071 ERP44 endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:18311] zzz999 81472 OR2C3 olfactory receptor, family 2, subfamily C, member 3 [Source:HGNC Symbol;Acc:15005] zzz999 374969 CCDC23 coiled-coil domain containing 23 [Source:HGNC Symbol;Acc:29204] zzz999 55312 RFK riboflavin kinase [Source:HGNC Symbol;Acc:30324] zzz999 90480 GADD45GIP1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:HGNC Symbol;Acc:29996] zzz999 57452 GALNTL1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 [Source:HGNC Symbol;Acc:23233] zzz999 51247 PAIP2 poly(A) binding protein interacting protein 2 [Source:HGNC Symbol;Acc:17970] zzz999 10072 DPP3 dipeptidyl-peptidase 3 [Source:HGNC Symbol;Acc:3008] zzz999 134147 CMBL carboxymethylenebutenolidase homolog (Pseudomonas) [Source:HGNC Symbol;Acc:25090] zzz999 55224 ETNK2 ethanolamine kinase 2 [Source:HGNC Symbol;Acc:25575] T 55364 IMPACT Impact homolog (mouse) [Source:HGNC Symbol;Acc:20387] T 9694 TTC35 tetratricopeptide repeat domain 35 [Source:HGNC Symbol;Acc:28963] zzz999 118987 PDZD8 PDZ domain containing 8 [Source:HGNC Symbol;Acc:26974] zzz999 23473 CAPN7 calpain 7 [Source:HGNC Symbol;Acc:1484] zzz999 9559 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711] zzz999 83943 IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:HGNC Symbol;Acc:14598] zzz999 4646 MYO6 myosin VI [Source:HGNC Symbol;Acc:7605] T 80031 SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:HGNC Symbol;Acc:16770] P T 202018 TAPT1 transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:26887] zzz999 221016 CCDC7 coiled-coil domain containing 7 [Source:HGNC Symbol;Acc:26533] zzz999 51227 PIGP phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046] zzz999 10284 SAP18 Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] zzz999 23554 TSPAN12 tetraspanin 12 [Source:HGNC Symbol;Acc:21641] zzz999 23598 PATZ1 POZ (BTB) and AT hook containing zinc finger 1 [Source:HGNC Symbol;Acc:13071] T 6856 SYPL1 synaptophysin-like 1 [Source:HGNC Symbol;Acc:11507] zzz999 10449 ACAA2 acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:83] T 122786 FRMD6 FERM domain containing 6 [Source:HGNC Symbol;Acc:19839] zzz999 8669 EIF3J eukaryotic translation initiation factor 3, subunit J [Source:HGNC Symbol;Acc:3270] T 2729 GCLC glutamate-cysteine ligase, catalytic subunit [Source:HGNC Symbol;Acc:4311] T 1787 TRDMT1 tRNA aspartic acid methyltransferase 1 [Source:HGNC Symbol;Acc:2977] T 220107 DLEU7 deleted in lymphocytic leukemia, 7 [Source:HGNC Symbol;Acc:17567] zzz999 51642 MRPL48 mitochondrial ribosomal protein L48 [Source:HGNC Symbol;Acc:16653] zzz999 5193 PEX12 peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:8854] zzz999 116228 FAM36A family with sequence similarity 36, member A [Source:HGNC Symbol;Acc:26970] zzz999 5878 RAB5C RAB5C, member RAS oncogene family [Source:HGNC Symbol;Acc:9785] zzz999 80195 C10orf57 chromosome 10 open reading frame 57 [Source:HGNC Symbol;Acc:25804] T 727 C5 complement component 5 [Source:HGNC Symbol;Acc:1331] zzz999 10313 RTN3 reticulon 3 [Source:HGNC Symbol;Acc:10469] T 10193 RNF41 ring finger protein 41 [Source:HGNC Symbol;Acc:18401] T 51562 MBIP MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:20427] zzz999 28977 MRPL42 mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:14493] T 11160 ERLIN2 ER lipid raft associated 2 [Source:HGNC Symbol;Acc:1356] P T 25814 ATXN10 ataxin 10 [Source:HGNC Symbol;Acc:10549] T 6845 VAMP7 vesicle-associated membrane protein 7 [Source:HGNC Symbol;Acc:11486] zzz999 57826 RAP2C RAP2C, member of RAS oncogene family [Source:HGNC Symbol;Acc:21165] P T 5868 RAB5A RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783] zzz999 10767 HBS1L HBS1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:4834] T 84632 AFAP1L2 actin filament associated protein 1-like 2 [Source:HGNC Symbol;Acc:25901] T 1147 CHUK conserved helix-loop-helix ubiquitous kinase [Source:HGNC Symbol;Acc:1974] zzz999 9308 CD83 CD83 molecule [Source:HGNC Symbol;Acc:1703] T 54529 ASNSD1 asparagine synthetase domain containing 1 [Source:HGNC Symbol;Acc:24910] zzz999 7071 KLF10 Kruppel-like factor 10 [Source:HGNC Symbol;Acc:11810] T 9522 zzz999 zzz999 T 84064 HDHD2 haloacid dehalogenase-like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:25364] zzz999 29099 COMMD9 COMM domain containing 9 [Source:HGNC Symbol;Acc:25014] zzz999 5827 PXMP2 peroxisomal membrane protein 2, 22kDa [Source:HGNC Symbol;Acc:9716] zzz999 5026 P2RX5 purinergic receptor P2X, ligand-gated ion channel, 5 [Source:HGNC Symbol;Acc:8536] zzz999 2053 EPHX2 epoxide hydrolase 2, cytoplasmic [Source:HGNC Symbol;Acc:3402] T 51719 CAB39 calcium binding protein 39 [Source:HGNC Symbol;Acc:20292] zzz999 117143 TADA1 transcriptional adaptor 1 [Source:HGNC Symbol;Acc:30631] zzz999 8634 RTCD1 RNA terminal phosphate cyclase domain 1 [Source:HGNC Symbol;Acc:17981] zzz999 6726 SRP9 signal recognition particle 9kDa [Source:HGNC Symbol;Acc:11304] zzz999 81790 RNF170 ring finger protein 170 [Source:HGNC Symbol;Acc:25358] zzz999 7779 SLC30A1 solute carrier family 30 (zinc transporter), member 1 [Source:HGNC Symbol;Acc:11012] T 135114 HINT3 histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:18468] T 123228 SENP8 SUMO/sentrin specific peptidase family member 8 [Source:HGNC Symbol;Acc:22992] zzz999 171546 C14orf147 chromosome 14 open reading frame 147 [Source:HGNC Symbol;Acc:20361] T 112487 C14orf126 chromosome 14 open reading frame 126 [Source:HGNC Symbol;Acc:20277] zzz999 201965 RWDD4 RWD domain containing 4 [Source:HGNC Symbol;Acc:23750] T 11104 KATNA1 katanin p60 (ATPase containing) subunit A 1 [Source:HGNC Symbol;Acc:6216] zzz999 4528 MTIF2 mitochondrial translational initiation factor 2 [Source:HGNC Symbol;Acc:7441] zzz999 10480 EIF3M eukaryotic translation initiation factor 3, subunit M [Source:HGNC Symbol;Acc:24460] zzz999 65062 ALS2CR4 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 [Source:HGNC Symbol;Acc:14432] T 64398 MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) [Source:HGNC Symbol;Acc:18669] T 1653 DDX1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Source:HGNC Symbol;Acc:2734] zzz999 79966 SCD5 stearoyl-CoA desaturase 5 [Source:HGNC Symbol;Acc:21088] T 7341 SUMO1 SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:12502] T 119504 ANAPC16 anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:26976] zzz999 10490 VTI1B vesicle transport through interaction with t-SNAREs homolog 1B (yeast) [Source:HGNC Symbol;Acc:17793] zzz999 130074 FAM168B family with sequence similarity 168, member B [Source:HGNC Symbol;Acc:27016] zzz999 482 ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide [Source:HGNC Symbol;Acc:805] zzz999 2252 FGF7 fibroblast growth factor 7 [Source:HGNC Symbol;Acc:3685] P T 55854 ZC3H15 zinc finger CCCH-type containing 15 [Source:HGNC Symbol;Acc:29528] P T

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